RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g37250.1 View Network Show in Genome Browser |
| Other Names | Os07g0558500 |
| Description | THYLAKOID FORMATION1, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 22319007-22323191 Nucleotide Length: 864 |
| Protein-coding | LOC_Os07g37250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g51470 LOC_Os05g26890 LOC_Os03g16050 LOC_Os06g04150 LOC_Os05g40180 LOC_Os03g10060 LOC_Os06g09610 LOC_Os04g38750 LOC_Os02g02390 LOC_Os02g43600 LOC_Os07g11110 More.. |
| Downstream Genes | LOC_Os09g10760 LOC_Os11g47970 LOC_Os07g41630 LOC_Os09g32988 LOC_Os08g41990 LOC_Os09g23550 LOC_Os07g47640 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g37250.1 |
| Rice Genome Annotation | LOC_Os07g37250.1 |
| Ricechip | LOC_Os07g37250.1 |
| KEGG | osa:4343584 dosa:Os07t0558500-01 |
| Entrez-Gene | 4343584 |