RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g37640.1 View Network Show in Genome Browser |
| Other Names | Os07g0563700 |
| Description | IKI3 family protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 22565757-22571603 Nucleotide Length: 4032 |
| Protein-coding | LOC_Os07g37640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0040007 | growth | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g40840 LOC_Os06g45070 LOC_Os03g05260 LOC_Os03g03164 LOC_Os01g51200 LOC_Os02g53230 LOC_Os03g44484 LOC_Os02g08544 LOC_Os06g43860 LOC_Os05g05860 LOC_Os05g51560 More.. |
| Downstream Genes | LOC_Os08g38570 LOC_Os08g19650 LOC_Os09g02284 LOC_Os11g05730 LOC_Os11g16430 LOC_Os08g06070 LOC_Os08g25200 LOC_Os12g35030 LOC_Os09g30210 LOC_Os10g10434 LOC_Os10g05240 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g37640.1 |
| Rice Genome Annotation | LOC_Os07g37640.1 |
| Ricechip | LOC_Os07g37640.1 |
| KEGG | osa:4343611 dosa:Os07t0563700-01 |
| Entrez-Gene | 4343611 |