RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g37980.1 View Network Show in Genome Browser |
| Other Names | Os07g0567200 |
| Description | cytochrome P450 51, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 22788931-22791186 Nucleotide Length: 663 |
| Protein-coding | LOC_Os07g37980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0019825 | oxygen binding | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g41800 LOC_Os03g21400 LOC_Os03g39540 LOC_Os01g41820 LOC_Os01g43844 LOC_Os01g43774 LOC_Os01g24780 LOC_Os01g43760 LOC_Os05g40384 LOC_Os01g41810 LOC_Os01g63540 More.. |
| Downstream Genes | LOC_Os12g05440 LOC_Os11g05380 LOC_Os11g04310 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1848 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00100 rn01100 rn01110 |
| Metacyc Pathways | PWY-2541 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g37980.1 |
| Rice Genome Annotation | LOC_Os07g37980.1 |
| Ricechip | LOC_Os07g37980.1 |