RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g38060.1 View Network Show in Genome Browser |
| Other Names | Os07g0568000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 22817178-22822175 Nucleotide Length: 2322 |
| Protein-coding | LOC_Os07g38060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g45930 LOC_Os01g54080 LOC_Os03g64320 LOC_Os01g52050 LOC_Os03g61620 LOC_Os03g17840 LOC_Os02g47420 LOC_Os06g17440 LOC_Os02g48830 LOC_Os04g42290 LOC_Os05g44070 More.. |
| Downstream Genes | LOC_Os10g35450 LOC_Os09g38440 LOC_Os09g13630 LOC_Os10g41370 LOC_Os08g40820 LOC_Os07g43990 LOC_Os11g01790 LOC_Os07g44350 LOC_Os10g09870 LOC_Os12g41620 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g38060.1 |
| Rice Genome Annotation | LOC_Os07g38060.1 |
| Ricechip | LOC_Os07g38060.1 |
| KEGG | osa:4343638 dosa:Os07t0568000-01 |
| Entrez-Gene | 4343638 |