RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g38130.1 View Network Show in Genome Browser |
| Other Names | Os07g0568700 |
| Description | polygalacturonase inhibitor 1 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 22874252-22875707 Nucleotide Length: 999 |
| Protein-coding | LOC_Os07g38130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02939 LOC_Os03g56820 LOC_Os03g40270 LOC_Os03g11980 LOC_Os04g28260 LOC_Os05g43690 |
| Downstream Genes | LOC_Os09g16920 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Reference | |
|---|---|
| PubMed | 14750524 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g38130.1 |
| Rice Genome Annotation | LOC_Os07g38130.1 |
| Ricechip | LOC_Os07g38130.1 |
| KEGG | osa:4343645 dosa:Os07t0568700-02 |
| Entrez-Gene | 4343645 |