RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g38300.5 View Network Show in Genome Browser |
| Other Names | Os07g0570700 |
| Description | ribosome recycling factor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 23003380-23008497 Nucleotide Length: 426 |
| Protein-coding | LOC_Os07g38300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g33300 LOC_Os01g73450 LOC_Os02g24612 LOC_Os01g63830 LOC_Os03g38230 LOC_Os02g03460 LOC_Os01g55360 LOC_Os03g08440 LOC_Os06g07120 LOC_Os07g33850 LOC_Os03g17580 More.. |
| Downstream Genes | LOC_Os12g35630 LOC_Os08g25290 LOC_Os10g17990 LOC_Os07g41680 LOC_Os07g42450 LOC_Os11g41910 LOC_Os08g44290 LOC_Os10g36470 LOC_Os09g38420 LOC_Os12g37610 LOC_Os11g26160 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR395o |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g38300.5 |
| Rice Genome Annotation | LOC_Os07g38300.5 |
| Ricechip | LOC_Os07g38300.5 |
| KEGG | osa:4343662 dosa:Os07t0570700-01 |
| Entrez-Gene | 4343662 |