RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g38600.1 View Network Show in Genome Browser |
| Other Names | Os07g0573600 |
| Description | REX1 DNA Repair family protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 23185305-23186940 Nucleotide Length: 396 |
| Protein-coding | LOC_Os07g38600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g07160 LOC_Os01g49680 LOC_Os05g32600 LOC_Os04g42990 LOC_Os04g58350 LOC_Os04g52900 LOC_Os02g03340 LOC_Os05g05260 LOC_Os03g52750 LOC_Os06g07480 LOC_Os02g18880 More.. |
| Downstream Genes | LOC_Os10g41400 LOC_Os09g24540 LOC_Os08g25060 LOC_Os11g28350 LOC_Os09g04730 LOC_Os12g06510 LOC_Os10g18530 LOC_Os09g34230 LOC_Os08g38160 LOC_Os10g18480 LOC_Os10g18510 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g38600.1 |
| Rice Genome Annotation | LOC_Os07g38600.1 |
| Ricechip | LOC_Os07g38600.1 |
| KEGG | osa:4343686 dosa:Os07t0573600-01 |
| Entrez-Gene | 4343686 |