RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g38760.1 View Network Show in Genome Browser |
| Other Names | Os07g0575100 |
| Description | HEAT repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 23256424-23265294 Nucleotide Length: 3372 |
| Protein-coding | LOC_Os07g38760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g25370 LOC_Os05g06350 LOC_Os05g38520 LOC_Os01g62350 LOC_Os03g51140 LOC_Os05g28510 LOC_Os01g60040 LOC_Os01g60440 LOC_Os02g06592 LOC_Os05g28750 LOC_Os01g19840 More.. |
| Downstream Genes | LOC_Os09g07510 LOC_Os10g36490 LOC_Os09g38710 LOC_Os12g06890 LOC_Os11g05730 LOC_Os09g15770 LOC_Os12g06870 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os12g38110 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g38760.1 |
| Rice Genome Annotation | LOC_Os07g38760.1 |
| Ricechip | LOC_Os07g38760.1 |
| KEGG | osa:4343696 dosa:Os07t0575100-00 |
| Entrez-Gene | 4343696 |