RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g38930.1 View Network Show in Genome Browser |
| Other Names | Os07g0577300 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 23344089-23348726 Nucleotide Length: 1497 |
| Protein-coding | LOC_Os07g38930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g05740 LOC_Os02g08180 LOC_Os05g06440 LOC_Os07g10830 LOC_Os05g48310 LOC_Os05g48220 LOC_Os02g54470 LOC_Os03g14990 LOC_Os04g40950 LOC_Os03g63410 LOC_Os04g30760 More.. |
| Downstream Genes | LOC_Os09g20090 LOC_Os07g42960 LOC_Os08g05880 LOC_Os10g41410 LOC_Os08g17680 LOC_Os08g03640 LOC_Os11g03670 LOC_Os11g04070 LOC_Os12g03880 LOC_Os12g05430 LOC_Os11g09280 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g38930.1 |
| Rice Genome Annotation | LOC_Os07g38930.1 |
| Ricechip | LOC_Os07g38930.1 |
| KEGG | osa:4343706 dosa:Os07t0577300-01 |
| Entrez-Gene | 4343706 |