RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g39280.1 View Network Show in Genome Browser |
| Other Names | Os07g0581000 |
| Description | transporter-related, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 23511899-23515632 Nucleotide Length: 1038 |
| Protein-coding | LOC_Os07g39280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g25820 LOC_Os04g09720 LOC_Os05g41480 LOC_Os02g46380 LOC_Os01g58870 LOC_Os03g37010 LOC_Os07g10770 LOC_Os01g53240 LOC_Os06g22330 LOC_Os02g48190 LOC_Os03g18170 More.. |
| Downstream Genes | LOC_Os07g43170 LOC_Os11g27329 LOC_Os11g27264 LOC_Os10g01110 LOC_Os09g38510 LOC_Os09g25900 LOC_Os10g22590 LOC_Os10g26050 LOC_Os09g15340 LOC_Os10g35180 LOC_Os07g46170 More.. |
| Reference | |
|---|---|
| PubMed | 20305274 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g39280.1 |
| Rice Genome Annotation | LOC_Os07g39280.1 |
| Ricechip | LOC_Os07g39280.1 |
| KEGG | osa:4343722 dosa:Os07t0581000-01 |
| Entrez-Gene | 4343722 |