RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g39690.1 View Network Show in Genome Browser |
| Other Names | Os07g0585600 |
| Description | GCN5-related N-acetyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 23784957-23791388 Nucleotide Length: 1776 |
| Protein-coding | LOC_Os07g39690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g42110 LOC_Os05g03830 LOC_Os03g17120 LOC_Os07g27780 LOC_Os01g74152 LOC_Os03g44150 LOC_Os02g47590 LOC_Os03g61829 LOC_Os03g60180 LOC_Os02g47850 LOC_Os03g16670 More.. |
| Downstream Genes | LOC_Os10g35170 LOC_Os09g36800 LOC_Os07g44060 LOC_Os12g13320 LOC_Os11g19770 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5076 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00330 rn01100 rn01110 rn01210 |
| Metacyc Pathways | ARGSYNBSUB-PWY GLUTORN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g39690.1 |
| Rice Genome Annotation | LOC_Os07g39690.1 |
| Ricechip | LOC_Os07g39690.1 |
| KEGG | osa:4343745 dosa:Os07t0585600-01 |
| Entrez-Gene | 4343745 |