RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g39870.3 View Network Show in Genome Browser |
| Other Names | Os07g0587400 |
| Description | eukaryotic peptide chain release factor subunit 1-1, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 23904920-23909015 Nucleotide Length: 1314 |
| Protein-coding | LOC_Os07g39870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g38520 LOC_Os01g62350 LOC_Os03g18570 LOC_Os05g27940 LOC_Os03g18580 LOC_Os04g20220 LOC_Os02g14059 LOC_Os06g35730 LOC_Os05g11710 LOC_Os01g10820 LOC_Os03g05980 More.. |
| Downstream Genes | LOC_Os11g38959 LOC_Os08g02340 LOC_Os11g24610 LOC_Os10g26050 LOC_Os12g05430 LOC_Os07g47710 LOC_Os12g03090 LOC_Os11g03400 LOC_Os10g27174 LOC_Os11g05370 LOC_Os12g21798 More.. |
| Reference | |
|---|---|
| PubMed | 16147864 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g39870.3 |
| Rice Genome Annotation | LOC_Os07g39870.3 |
| Ricechip | LOC_Os07g39870.3 |
| KEGG | osa:4343757 dosa:Os07t0587400-01 |
| Entrez-Gene | 4343757 |