RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g39880.1 View Network Show in Genome Browser |
| Other Names | Os07g0587500 |
| Description | retrotransposon, putative, centromere-specific, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 23911798-23913680 Nucleotide Length: 1233 |
| Protein-coding | LOC_Os07g39880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g33670 LOC_Os05g06350 LOC_Os04g59494 LOC_Os02g52370 LOC_Os05g28510 LOC_Os03g18350 LOC_Os03g07190 |
| Downstream Genes | LOC_Os09g36550 LOC_Os12g24550 LOC_Os11g18947 LOC_Os12g38110 LOC_Os10g05230 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g39880.1 |
| Rice Genome Annotation | LOC_Os07g39880.1 |
| Ricechip | LOC_Os07g39880.1 |
| KEGG | osa:4343758 dosa:Os07t0587500-01 |
| Entrez-Gene | 4343758 |