RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g40700.2 View Network Show in Genome Browser |
| Other Names | Os07g0598100 |
| Description | RNA methyltransferase, TrmH family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 24389154-24392742 Nucleotide Length: 1032 |
| Protein-coding | LOC_Os07g40700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22160 LOC_Os02g47120 LOC_Os02g51780 |
| Downstream Genes | LOC_Os08g39600 LOC_Os12g37610 LOC_Os12g33100 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2102-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g40700.2 |
| Rice Genome Annotation | LOC_Os07g40700.2 |
| Ricechip | LOC_Os07g40700.2 |
| KEGG | osa:4343801 dosa:Os07t0598100-01 |
| Entrez-Gene | 4343801 |