RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g40740.1 View Network Show in Genome Browser |
| Other Names | Os07g0598400 |
| Description | heparanase-like protein precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 24417383-24419441 Nucleotide Length: 1590 |
| Protein-coding | LOC_Os07g40740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g51030 LOC_Os06g49890 LOC_Os04g21710 |
| Downstream Genes | LOC_Os12g16180 LOC_Os08g04890 LOC_Os12g28270 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5819 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g40740.1 |
| Rice Genome Annotation | LOC_Os07g40740.1 |
| Ricechip | LOC_Os07g40740.1 |
| KEGG | osa:4343804 dosa:Os07t0598400-01 |
| Entrez-Gene | 4343804 |