RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g40800.1 View Network Show in Genome Browser |
| Other Names | Os07g0599000 |
| Description | PPR repeat domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 24451618-24455574 Nucleotide Length: 1872 |
| Protein-coding | LOC_Os07g40800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01970 LOC_Os03g52470 LOC_Os03g63410 LOC_Os03g22690 LOC_Os06g05250 LOC_Os07g10830 LOC_Os03g14990 LOC_Os02g44810 LOC_Os07g29360 LOC_Os03g49580 LOC_Os07g12890 More.. |
| Downstream Genes | LOC_Os08g45010 LOC_Os09g39780 LOC_Os07g42080 LOC_Os11g36050 LOC_Os10g32550 LOC_Os09g02810 LOC_Os08g38010 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g40800.1 |
| Rice Genome Annotation | LOC_Os07g40800.1 |
| Ricechip | LOC_Os07g40800.1 |
| KEGG | osa:4343808 dosa:Os07t0599000-01 |
| Entrez-Gene | 4343808 |