RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g40930.1 View Network Show in Genome Browser |
| Other Names | Os07g0600400 |
| Description | WD repeat-containing protein 12, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 24493702-24497576 Nucleotide Length: 1311 |
| Protein-coding | LOC_Os07g40930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g49210 LOC_Os07g25440 LOC_Os02g26850 LOC_Os03g22350 LOC_Os05g48422 LOC_Os06g09570 LOC_Os03g58810 LOC_Os07g01920 LOC_Os02g02360 LOC_Os01g27730 LOC_Os07g10350 More.. |
| Downstream Genes | LOC_Os10g35280 LOC_Os12g29660 LOC_Os07g46760 LOC_Os08g32090 LOC_Os11g01420 LOC_Os08g31810 LOC_Os12g01430 LOC_Os09g18320 LOC_Os07g47420 LOC_Os07g44620 LOC_Os11g06750 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g40930.1 |
| Rice Genome Annotation | LOC_Os07g40930.1 |
| Ricechip | LOC_Os07g40930.1 |
| KEGG | osa:4343819 dosa:Os07t0600400-01 |
| Entrez-Gene | 4343819 |