RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g40940.1 View Network Show in Genome Browser |
| Other Names | Os07g0600700 |
| Description | X8 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 24505166-24508963 Nucleotide Length: 585 |
| Protein-coding | LOC_Os07g40940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0030246 | carbohydrate binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g30150 LOC_Os03g14610 LOC_Os07g38590 LOC_Os02g41550 LOC_Os04g42620 LOC_Os03g61100 LOC_Os03g61620 LOC_Os04g42520 LOC_Os02g40010 LOC_Os04g51630 LOC_Os06g28480 More.. |
| Downstream Genes | LOC_Os11g36340 LOC_Os12g39860 LOC_Os08g23730 LOC_Os12g40130 LOC_Os08g13690 LOC_Os10g25780 LOC_Os07g48370 LOC_Os11g34350 LOC_Os11g26190 LOC_Os12g05430 LOC_Os10g29470 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g40940.1 |
| Rice Genome Annotation | LOC_Os07g40940.1 |
| Ricechip | LOC_Os07g40940.1 |
| KEGG | osa:4343820 dosa:Os07t0600700-01 |
| Entrez-Gene | 4343820 |