RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g41080.1 View Network Show in Genome Browser |
| Other Names | Os07g0602100,Os07g0602050 |
| Description | hydrolase, alpha/beta fold family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 24575162-24584259 Nucleotide Length: 2103 |
| Protein-coding | LOC_Os07g41080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g19150 LOC_Os07g37840 LOC_Os03g51010 LOC_Os01g49380 LOC_Os05g46460 LOC_Os05g43830 LOC_Os05g29974 LOC_Os02g11720 LOC_Os01g21560 |
| Downstream Genes | LOC_Os09g34860 LOC_Os12g43970 LOC_Os07g41230 LOC_Os07g48610 LOC_Os12g16180 LOC_Os10g04620 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00970 |
| Metacyc Pathways | TRNA-CHARGING-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g41080.1 |
| Rice Genome Annotation | LOC_Os07g41080.1 |
| Ricechip | LOC_Os07g41080.1 |
| KEGG | osa:4343828 dosa:Os07t0602100-01dosa:Os07t0602050-00 |
| Entrez-Gene | 4343828 |