RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g41190.1 View Network Show in Genome Browser |
| Other Names | Os07g0603200 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 24660133-24662594 Nucleotide Length: 1674 |
| Protein-coding | LOC_Os07g41190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g50660 LOC_Os03g05720 LOC_Os06g43690 LOC_Os05g44320 LOC_Os04g46310 LOC_Os07g12320 LOC_Os03g52470 LOC_Os07g33340 LOC_Os02g02360 LOC_Os03g02110 LOC_Os03g42770 More.. |
| Downstream Genes | LOC_Os12g07300 LOC_Os07g47420 LOC_Os12g04010 LOC_Os10g42320 LOC_Os09g18320 LOC_Os12g29660 LOC_Os11g04200 LOC_Os12g06910 LOC_Os08g05880 LOC_Os12g36950 LOC_Os10g01540 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g41190.1 |
| Rice Genome Annotation | LOC_Os07g41190.1 |
| Ricechip | LOC_Os07g41190.1 |
| KEGG | osa:4343836 dosa:Os07t0603200-01 |
| Entrez-Gene | 4343836 |