RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os07g41800.2 View Network Show in Genome Browser
Other Names	Os07g0608800
Description	peroxisome assembly protein, putative, expressed
Gene Attributes	Chromosome: Chr7 CDS Coordinates (5'-3'): 25039214-25043735 Nucleotide Length: 801
Protein-coding	LOC_Os07g41800

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009790	embryo development	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005777	peroxisome	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os05g19480 LOC_Os02g42314 LOC_Os03g57210 LOC_Os02g44220 LOC_Os07g05810 LOC_Os03g48940 LOC_Os04g35060 LOC_Os06g19680 LOC_Os03g19059 LOC_Os03g05570 LOC_Os02g47870 More..
Downstream Genes	LOC_Os10g32960 LOC_Os08g39080 LOC_Os08g44240 LOC_Os08g41730 LOC_Os10g36370 LOC_Os12g01190 LOC_Os09g32800 LOC_Os11g05880 LOC_Os09g30418 LOC_Os09g30412 LOC_Os08g39140 More..

miRNA Regulations
miRNAs	osa-miR2878-3p

Database Links
Gramene	LOC_Os07g41800.2
Rice Genome Annotation	LOC_Os07g41800.2
Ricechip	LOC_Os07g41800.2
KEGG	osa:4343871 dosa:Os07t0608800-01
Entrez-Gene	4343871