RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g42180.1 View Network Show in Genome Browser |
| Other Names | Os07g0613300 |
| Description | exportin 1, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 25239765-25248466 Nucleotide Length: 2943 |
| Protein-coding | LOC_Os07g42180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g49890 LOC_Os01g26160 LOC_Os07g29420 LOC_Os07g03230 LOC_Os06g07580 LOC_Os02g56014 LOC_Os04g26841 LOC_Os03g27260 LOC_Os02g37430 LOC_Os02g44810 LOC_Os04g39444 More.. |
| Downstream Genes | LOC_Os10g33770 LOC_Os11g34120 LOC_Os07g42950 LOC_Os12g07350 LOC_Os12g41400 LOC_Os12g07740 LOC_Os12g34510 LOC_Os08g33100 LOC_Os10g26050 LOC_Os09g21110 LOC_Os11g01510 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 osa-miR2093-3p osa-miR5542 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g42180.1 |
| Rice Genome Annotation | LOC_Os07g42180.1 |
| Ricechip | LOC_Os07g42180.1 |
| KEGG | osa:4343885 dosa:Os07t0613300-01 |
| Entrez-Gene | 4343885 |