RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g42260.2 View Network Show in Genome Browser |
| Other Names | Os07g0614100 |
| Description | peptidase, T1 family, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 25290824-25293793 Nucleotide Length: 660 |
| Protein-coding | LOC_Os07g42260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g66730 LOC_Os01g47256 LOC_Os04g43922 LOC_Os03g63720 LOC_Os03g62720 LOC_Os05g19370 LOC_Os03g40180 LOC_Os05g48320 LOC_Os01g48770 LOC_Os02g34570 LOC_Os03g45410 More.. |
| Downstream Genes | LOC_Os08g01620 LOC_Os09g07820 LOC_Os08g02360 LOC_Os09g32800 LOC_Os12g21500 LOC_Os11g20689 LOC_Os12g39070 LOC_Os12g32240 LOC_Os12g21798 LOC_Os08g41730 LOC_Os07g48300 More.. |
| Reference | |
|---|---|
| PubMed | 11470506 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g42260.2 |
| Rice Genome Annotation | LOC_Os07g42260.2 |
| Ricechip | LOC_Os07g42260.2 |
| KEGG | osa:4343891 dosa:Os07t0614100-01 |
| Entrez-Gene | 4343891 |