RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g42300.1 View Network Show in Genome Browser |
| Other Names | Os07g0614500 |
| Description | elongation factor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 25314328-25316677 Nucleotide Length: 756 |
| Protein-coding | LOC_Os07g42300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22180 LOC_Os05g06310 LOC_Os04g42380 LOC_Os06g37440 LOC_Os03g08050 LOC_Os03g08020 LOC_Os03g08010 LOC_Os07g10720 LOC_Os05g27940 LOC_Os02g47140 LOC_Os04g50990 More.. |
| Downstream Genes | LOC_Os07g47780 LOC_Os08g10608 LOC_Os09g32976 LOC_Os08g23710 LOC_Os11g24610 LOC_Os12g03090 LOC_Os11g03400 LOC_Os09g31180 LOC_Os08g39500 LOC_Os10g27174 LOC_Os08g44450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g42300.1 |
| Rice Genome Annotation | LOC_Os07g42300.1 |
| Ricechip | LOC_Os07g42300.1 |
| KEGG | osa:4343894 dosa:Os07t0614500-01 |
| Entrez-Gene | 4343894 |