RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g42390.1 View Network Show in Genome Browser |
| Other Names | Os07g0615500 |
| Description | DUF581 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 25363519-25364560 Nucleotide Length: 594 |
| Protein-coding | LOC_Os07g42390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g11380 LOC_Os07g11360 LOC_Os01g55690 LOC_Os02g25640 LOC_Os03g07226 LOC_Os07g11650 LOC_Os02g16820 LOC_Os07g12080 LOC_Os07g10580 LOC_Os07g10570 LOC_Os07g11630 More.. |
| Downstream Genes | LOC_Os10g26060 LOC_Os08g45110 LOC_Os07g47240 LOC_Os10g11580 LOC_Os12g42670 LOC_Os11g31330 LOC_Os10g25850 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR531b |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g42390.1 |
| Rice Genome Annotation | LOC_Os07g42390.1 |
| Ricechip | LOC_Os07g42390.1 |
| KEGG | osa:4343901 dosa:Os07t0615500-01 |
| Entrez-Gene | 4343901 |