RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g42810.1 View Network Show in Genome Browser |
| Other Names | Os07g0620300 |
| Description | adaptor complexes medium subunit family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 25640847-25645862 Nucleotide Length: 1356 |
| Protein-coding | LOC_Os07g42810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g24601 LOC_Os01g61710 LOC_Os03g50300 LOC_Os05g41060 LOC_Os01g59790 LOC_Os05g22670 LOC_Os03g59740 LOC_Os01g16030 LOC_Os07g12200 LOC_Os07g12170 LOC_Os06g07090 More.. |
| Downstream Genes | LOC_Os08g28080 LOC_Os12g34370 LOC_Os08g01930 LOC_Os08g34340 LOC_Os12g40340 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5490 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g42810.1 |
| Rice Genome Annotation | LOC_Os07g42810.1 |
| Ricechip | LOC_Os07g42810.1 |
| KEGG | osa:4343931 dosa:Os07t0620300-01 |
| Entrez-Gene | 4343931 |