RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g42960.2 View Network Show in Genome Browser |
| Other Names | Os07g0622200 |
| Description | phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 25726418-25730181 Nucleotide Length: 1071 |
| Protein-coding | LOC_Os07g42960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g14990 LOC_Os07g12890 LOC_Os02g08180 LOC_Os04g53490 LOC_Os02g45820 LOC_Os02g39930 LOC_Os02g32030 LOC_Os03g63410 LOC_Os07g14270 LOC_Os02g54700 LOC_Os06g39260 More.. |
| Downstream Genes | LOC_Os08g17680 LOC_Os09g19734 LOC_Os11g37080 LOC_Os08g05880 LOC_Os12g25710 LOC_Os12g05430 LOC_Os08g03640 LOC_Os10g28000 LOC_Os12g38310 LOC_Os11g04070 LOC_Os09g20090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g42960.2 |
| Rice Genome Annotation | LOC_Os07g42960.2 |
| Ricechip | LOC_Os07g42960.2 |
| KEGG | osa:4343946 dosa:Os07t0622200-01 |
| Entrez-Gene | 4343946 |