RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g43170.3 View Network Show in Genome Browser |
| Other Names | Os07g0624700 |
| Description | adenylate kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 25878414-25882559 Nucleotide Length: 633 |
| Protein-coding | LOC_Os07g43170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g12020 LOC_Os06g39700 LOC_Os03g61260 LOC_Os03g07340 LOC_Os03g54040 LOC_Os03g24020 LOC_Os05g33020 LOC_Os03g49710 LOC_Os01g42640 LOC_Os03g26860 LOC_Os03g59310 More.. |
| Downstream Genes | LOC_Os08g15460 LOC_Os08g21840 LOC_Os09g07910 LOC_Os09g17840 LOC_Os09g17830 LOC_Os10g32920 LOC_Os09g19952 LOC_Os11g37510 LOC_Os12g33100 LOC_Os09g19954 LOC_Os12g30490 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 rn00230 rn01110 |
| Metacyc Pathways | PWY0-162 P1-PWY DENOVOPURINE2-PWY PWY-6126 PWY0-163 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g43170.3 |
| Rice Genome Annotation | LOC_Os07g43170.3 |
| Ricechip | LOC_Os07g43170.3 |
| KEGG | osa:4343960 dosa:Os07t0624700-01 |
| Entrez-Gene | 4343960 |