RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g43510.1 View Network Show in Genome Browser |
| Other Names | Os07g0628400 |
| Description | 40S ribosomal protein S9, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 26036088-26039317 Nucleotide Length: 261 |
| Protein-coding | LOC_Os07g43510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g07770 LOC_Os07g07719 LOC_Os07g07709 LOC_Os03g58050 LOC_Os02g01540 LOC_Os02g33140 LOC_Os02g06700 LOC_Os03g18410 LOC_Os02g49180 |
| Downstream Genes | LOC_Os09g02284 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g43510.1 |
| Rice Genome Annotation | LOC_Os07g43510.1 |
| Ricechip | LOC_Os07g43510.1 |
| KEGG | dosa:Os07t0628400-00 |