RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g43580.1 View Network Show in Genome Browser |
| Other Names | Os07g0629000 |
| Description | MYB family transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 26075299-26077154 Nucleotide Length: 1026 |
| Protein-coding | LOC_Os07g43580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g47840 LOC_Os03g52840 |
| Downstream Genes | LOC_Os08g42600 LOC_Os12g39210 LOC_Os12g31810 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g43580.1 |
| Rice Genome Annotation | LOC_Os07g43580.1 |
| Ricechip | LOC_Os07g43580.1 |
| KEGG | osa:4343988 dosa:Os07t0629000-01 |
| Entrez-Gene | 4343988 |