RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g43940.1 View Network Show in Genome Browser |
| Other Names | Os07g0633100 |
| Description | X8 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 26259207-26263836 Nucleotide Length: 657 |
| Protein-coding | LOC_Os07g43940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g41550 LOC_Os07g30150 LOC_Os04g37920 LOC_Os02g36380 LOC_Os04g58580 |
| Downstream Genes | LOC_Os09g19790 LOC_Os08g30810 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g43940.1 |
| Rice Genome Annotation | LOC_Os07g43940.1 |
| Ricechip | LOC_Os07g43940.1 |
| KEGG | osa:4344008 dosa:Os07t0633100-02 |
| Entrez-Gene | 4344008 |