RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g43950.1 View Network Show in Genome Browser |
| Other Names | Os07g0633200 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 26265494-26268673 Nucleotide Length: 642 |
| Protein-coding | LOC_Os07g43950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g45910 LOC_Os06g45900 LOC_Os01g72890 LOC_Os06g41790 LOC_Os02g40900 LOC_Os01g42820 LOC_Os06g38980 LOC_Os07g03240 LOC_Os05g30980 LOC_Os03g15890 LOC_Os01g71200 More.. |
| Downstream Genes | LOC_Os10g02630 LOC_Os08g29650 LOC_Os09g23590 LOC_Os09g03610 LOC_Os08g45240 LOC_Os08g40880 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g43950.1 |
| Rice Genome Annotation | LOC_Os07g43950.1 |
| Ricechip | LOC_Os07g43950.1 |
| KEGG | osa:4344009 dosa:Os07t0633200-01 |
| Entrez-Gene | 4344009 |