RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g43980.1 View Network Show in Genome Browser |
| Other Names | Os07g0633500 |
| Description | DEAD-box ATP-dependent RNA helicase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 26292134-26296155 Nucleotide Length: 1506 |
| Protein-coding | LOC_Os07g43980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08770 LOC_Os04g50660 LOC_Os06g49870 LOC_Os05g01990 LOC_Os02g26850 LOC_Os03g22350 LOC_Os02g49270 LOC_Os03g22890 LOC_Os02g02360 LOC_Os07g25440 LOC_Os05g02400 More.. |
| Downstream Genes | LOC_Os09g30210 LOC_Os09g18320 LOC_Os10g42320 LOC_Os10g01540 LOC_Os07g46760 LOC_Os12g43830 LOC_Os11g38170 LOC_Os09g37860 LOC_Os12g42370 LOC_Os08g05880 LOC_Os12g29660 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn00680 |
| Reference | |
|---|---|
| PubMed | 20607362 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g43980.1 |
| Rice Genome Annotation | LOC_Os07g43980.1 |
| Ricechip | LOC_Os07g43980.1 |
| KEGG | osa:4344011 dosa:Os07t0633500-00 |
| Entrez-Gene | 4344011 |