RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os07g44620.1 View Network Show in Genome Browser |
Other Names | Os07g0639800 |
Description | eukaryotic translation initiation factor 6, putative, expressed |
Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 26628439-26631263 Nucleotide Length: 738 |
Protein-coding | LOC_Os07g44620 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0009790 | embryo development | Biological Process | IEA | |
GO:0009791 | post-embryonic development | Biological Process | IEA | |
GO:0000003 | reproduction | Biological Process | IEA | |
GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
GO:0006412 | translation | Biological Process | IEA | |
GO:0005488 | binding | Molecular Function | IEA | |
GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005730 | nucleolus | Cellular Component | IEA | |
GO:0005634 | nucleus | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os06g09570 LOC_Os07g01920 LOC_Os03g49210 LOC_Os01g27730 LOC_Os02g49270 LOC_Os07g25440 LOC_Os05g48422 LOC_Os03g58810 LOC_Os01g33030 LOC_Os01g67134 LOC_Os06g30320 More.. |
Downstream Genes | LOC_Os09g37860 LOC_Os08g32090 LOC_Os11g01420 LOC_Os08g31810 LOC_Os12g01430 LOC_Os12g29660 LOC_Os11g06750 LOC_Os12g07010 LOC_Os07g47420 LOC_Os10g35280 LOC_Os07g47580 More.. |
Reference | |
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PubMed | 20570652 |
Database Links | |
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Gramene | LOC_Os07g44620.1 |
Rice Genome Annotation | LOC_Os07g44620.1 |
Ricechip | LOC_Os07g44620.1 |
KEGG | osa:4344055 dosa:Os07t0639800-01 |
Entrez-Gene | 4344055 |