RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g44630.1 View Network Show in Genome Browser |
| Other Names | Os07g0639900 |
| Description | thymidylate kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 26631322-26633686 Nucleotide Length: 762 |
| Protein-coding | LOC_Os07g44630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02200 LOC_Os05g51700 LOC_Os01g64820 LOC_Os01g55974 LOC_Os02g43920 LOC_Os06g07630 LOC_Os03g05300 LOC_Os01g16650 LOC_Os07g32480 LOC_Os05g31290 LOC_Os02g56000 More.. |
| Downstream Genes | LOC_Os11g29390 LOC_Os12g26060 LOC_Os10g34750 LOC_Os08g43580 LOC_Os11g31900 LOC_Os11g05570 LOC_Os09g36860 LOC_Os12g34890 LOC_Os11g29380 LOC_Os08g01054 LOC_Os07g46180 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 |
| Metacyc Pathways | PWY0-166 P1-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g44630.1 |
| Rice Genome Annotation | LOC_Os07g44630.1 |
| Ricechip | LOC_Os07g44630.1 |
| KEGG | osa:4344056 dosa:Os07t0639900-01 |
| Entrez-Gene | 4344056 |