RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g44840.1 View Network Show in Genome Browser |
| Other Names | Os07g0642900 |
| Description | bacterial transferase hexapeptide domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 26775249-26778679 Nucleotide Length: 822 |
| Protein-coding | LOC_Os07g44840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g52400 LOC_Os06g23160 LOC_Os07g04200 LOC_Os03g52460 LOC_Os05g45710 LOC_Os01g67590 LOC_Os02g04100 LOC_Os02g58340 |
| Downstream Genes | LOC_Os09g30100 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1866-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g44840.1 |
| Rice Genome Annotation | LOC_Os07g44840.1 |
| Ricechip | LOC_Os07g44840.1 |
| KEGG | osa:4344079 dosa:Os07t0642900-01 |
| Entrez-Gene | 4344079 |