RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g44950.1 View Network Show in Genome Browser |
| Other Names | Os07g0644100 |
| Description | bZIP transcription factor domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 26809796-26813252 Nucleotide Length: 1707 |
| Protein-coding | LOC_Os07g44950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g52780 LOC_Os06g39960 LOC_Os06g06810 LOC_Os03g13770 LOC_Os02g44520 LOC_Os06g10880 LOC_Os02g10860 LOC_Os01g07880 LOC_Os03g46340 LOC_Os01g64000 LOC_Os01g59760 More.. |
| Downstream Genes | LOC_Os12g39650 LOC_Os09g28310 LOC_Os08g36790 LOC_Os07g48660 LOC_Os12g32950 |
| Reference | |
|---|---|
| PubMed | 20331531 18065552 22050533 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g44950.1 |
| Rice Genome Annotation | LOC_Os07g44950.1 |
| Ricechip | LOC_Os07g44950.1 |
| KEGG | osa:4344086 dosa:Os07t0644100-01 |
| Entrez-Gene | 4344086 |