RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g45160.1 View Network Show in Genome Browser |
| Other Names | Os07g0646000 |
| Description | SAC3/GANP family protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 26952446-26962727 Nucleotide Length: 5391 |
| Protein-coding | LOC_Os07g45160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08450 LOC_Os05g38730 LOC_Os07g25420 LOC_Os01g73310 LOC_Os05g01600 LOC_Os03g61970 |
| Downstream Genes | LOC_Os11g06390 LOC_Os10g36650 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5822 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g45160.1 |
| Rice Genome Annotation | LOC_Os07g45160.1 |
| Ricechip | LOC_Os07g45160.1 |
| KEGG | osa:4344099 dosa:Os07t0646000-01 |
| Entrez-Gene | 4344099 |