RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g46440.1 View Network Show in Genome Browser |
| Other Names | Os07g0658200 |
| Description | ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 27706359-27709955 Nucleotide Length: 1248 |
| Protein-coding | LOC_Os07g46440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g54890 LOC_Os05g15360 LOC_Os05g15370 LOC_Os01g54540 LOC_Os07g01870 LOC_Os02g04660 LOC_Os07g10720 LOC_Os01g72130 LOC_Os03g39850 LOC_Os05g33230 LOC_Os07g05800 More.. |
| Downstream Genes | LOC_Os12g03090 LOC_Os11g03400 LOC_Os10g22170 LOC_Os09g20220 LOC_Os10g22070 LOC_Os08g42560 LOC_Os10g34020 LOC_Os08g38720 LOC_Os10g38540 LOC_Os10g35170 LOC_Os10g38730 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g46440.1 |
| Rice Genome Annotation | LOC_Os07g46440.1 |
| Ricechip | LOC_Os07g46440.1 |
| KEGG | osa:4344162 dosa:Os07t0658200-02 |
| Entrez-Gene | 4344162 |