RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g46490.1 View Network Show in Genome Browser |
| Other Names | Os07g0658700 |
| Description | phosphatidylinositol-4-phosphate 5-kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 27752721-27757305 Nucleotide Length: 2376 |
| Protein-coding | LOC_Os07g46490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g28140 LOC_Os03g63690 LOC_Os02g54910 LOC_Os01g27520 LOC_Os03g50320 LOC_Os05g41210 LOC_Os03g20370 LOC_Os01g16240 LOC_Os01g17190 LOC_Os03g07850 LOC_Os07g23200 More.. |
| Downstream Genes | LOC_Os12g40780 LOC_Os08g34950 LOC_Os07g48780 LOC_Os12g40770 LOC_Os11g10420 LOC_Os09g30418 LOC_Os09g30412 LOC_Os08g39140 LOC_Os12g37560 LOC_Os09g03630 LOC_Os09g03750 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00562 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g46490.1 |
| Rice Genome Annotation | LOC_Os07g46490.1 |
| Ricechip | LOC_Os07g46490.1 |
| KEGG | osa:4344166 dosa:Os07t0658700-01 |
| Entrez-Gene | 4344166 |