RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g46540.1 View Network Show in Genome Browser |
| Other Names | Os07g0659500 |
| Description | condensin complex subunit 1, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 27791106-27799497 Nucleotide Length: 3978 |
| Protein-coding | LOC_Os07g46540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67740 LOC_Os05g41750 LOC_Os07g01490 LOC_Os01g34870 LOC_Os06g51110 LOC_Os03g45760 LOC_Os05g43140 LOC_Os01g70560 LOC_Os07g14340 LOC_Os05g43610 LOC_Os03g56070 More.. |
| Downstream Genes | LOC_Os11g05730 LOC_Os10g28230 LOC_Os09g38710 LOC_Os09g38450 LOC_Os12g02710 LOC_Os11g02740 LOC_Os10g01570 LOC_Os12g41230 LOC_Os11g04220 LOC_Os09g07510 LOC_Os11g37100 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g46540.1 |
| Rice Genome Annotation | LOC_Os07g46540.1 |
| Ricechip | LOC_Os07g46540.1 |
| KEGG | osa:4344170 dosa:Os07t0659500-01 |
| Entrez-Gene | 4344170 |