RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g46600.1 View Network Show in Genome Browser |
| Other Names | Os07g0660400 |
| Description | RNA pseudouridine synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 27841389-27845434 Nucleotide Length: 1203 |
| Protein-coding | LOC_Os07g46600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g05806 LOC_Os03g17920 LOC_Os07g44940 LOC_Os01g56350 |
| Downstream Genes | LOC_Os12g37380 LOC_Os08g23430 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g46600.1 |
| Rice Genome Annotation | LOC_Os07g46600.1 |
| Ricechip | LOC_Os07g46600.1 |
| KEGG | osa:4344176 dosa:Os07t0660400-01 |
| Entrez-Gene | 4344176 |