RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g46630.1 View Network Show in Genome Browser |
| Other Names | Os07g0661000 |
| Description | AMP deaminase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 27865026-27868232 Nucleotide Length: 1107 |
| Protein-coding | LOC_Os07g46630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g28180 LOC_Os01g51540 LOC_Os06g40910 LOC_Os03g10990 LOC_Os05g38170 LOC_Os06g08800 LOC_Os01g03710 |
| Downstream Genes | LOC_Os07g49270 LOC_Os09g22090 LOC_Os11g38810 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn01100 |
| Metacyc Pathways | SALVADEHYPOX-PWY P121-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g46630.1 |
| Rice Genome Annotation | LOC_Os07g46630.1 |
| Ricechip | LOC_Os07g46630.1 |
| KEGG | osa:4344179 dosa:Os07t0661000-01 |
| Entrez-Gene | 4344179 |