RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g46660.1 View Network Show in Genome Browser |
| Other Names | Os07g0661300 |
| Description | ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 27883552-27888242 Nucleotide Length: 1677 |
| Protein-coding | LOC_Os07g46660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g41180 LOC_Os03g30550 LOC_Os04g30430 LOC_Os04g40420 LOC_Os02g29480 LOC_Os01g23630 LOC_Os07g10350 LOC_Os05g26660 LOC_Os04g46190 LOC_Os03g10340 LOC_Os01g08200 More.. |
| Downstream Genes | LOC_Os11g24560 LOC_Os09g24250 LOC_Os09g32740 LOC_Os12g21798 LOC_Os09g37860 LOC_Os09g39500 LOC_Os11g04070 LOC_Os12g03880 LOC_Os08g03640 LOC_Os09g12710 LOC_Os09g02700 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g46660.1 |
| Rice Genome Annotation | LOC_Os07g46660.1 |
| Ricechip | LOC_Os07g46660.1 |
| KEGG | osa:4344181 dosa:Os07t0661300-01 |
| Entrez-Gene | 4344181 |