RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g47240.1 View Network Show in Genome Browser |
| Other Names | Os07g0668600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 28233256-28234642 Nucleotide Length: 843 |
| Protein-coding | LOC_Os07g47240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g10580 LOC_Os07g10570 LOC_Os07g42390 LOC_Os07g11650 LOC_Os07g10560 LOC_Os07g11630 LOC_Os07g11510 LOC_Os02g25640 LOC_Os07g11380 LOC_Os07g11360 LOC_Os03g07226 More.. |
| Downstream Genes | LOC_Os10g26060 LOC_Os08g45110 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g47240.1 |
| Rice Genome Annotation | LOC_Os07g47240.1 |
| Ricechip | LOC_Os07g47240.1 |
| KEGG | osa:4344226 dosa:Os07t0668600-01 |
| Entrez-Gene | 4344226 |