RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os07g47300.1 View Network Show in Genome Browser
Other Names	Os07g0669250,Os07g0669200
Description	spo0B-associated GTP-binding protein, putative, expressed
Gene Attributes	Chromosome: Chr7 CDS Coordinates (5'-3'): 28277520-28281063 Nucleotide Length: 2259
Protein-coding	LOC_Os07g47300

Gene Ontology Classification
GO	Name	Type	Code
GO:0009056	catabolic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009790	embryo development	Biological Process	IEA
GO:0009790	embryo development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os04g25540 LOC_Os01g69950 LOC_Os02g15900 LOC_Os05g48410 LOC_Os01g55890 LOC_Os05g35540 LOC_Os01g27730 LOC_Os03g51840 LOC_Os05g38150 LOC_Os03g22890 LOC_Os05g49220 More..
Downstream Genes	LOC_Os08g31228 LOC_Os08g31219 LOC_Os12g42370 LOC_Os11g41910 LOC_Os09g32030 LOC_Os11g26030 LOC_Os08g31460 LOC_Os12g09570 LOC_Os12g13824 LOC_Os12g17320 LOC_Os08g09370 More..

miRNA Regulations
miRNAs	osa-miR2924

Database Links
Gramene	LOC_Os07g47300.1
Rice Genome Annotation	LOC_Os07g47300.1
Ricechip	LOC_Os07g47300.1
KEGG	osa:4344232 dosa:Os07t0669250-00 dosa:Os07t0669200-00