RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g47420.1 View Network Show in Genome Browser |
| Other Names | Os07g0670600 |
| Description | 60S ribosome subunit biogenesis protein NIP7, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 28352538-28354768 Nucleotide Length: 567 |
| Protein-coding | LOC_Os07g47420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g49270 LOC_Os03g49210 LOC_Os05g08360 LOC_Os04g52200 LOC_Os04g58830 LOC_Os02g57590 LOC_Os02g37870 LOC_Os01g27730 LOC_Os07g41190 LOC_Os05g44320 LOC_Os04g36890 More.. |
| Downstream Genes | LOC_Os09g37860 LOC_Os08g37780 LOC_Os08g27824 LOC_Os10g42320 LOC_Os08g32090 LOC_Os10g32550 LOC_Os10g35280 LOC_Os11g01420 LOC_Os12g01430 LOC_Os12g29660 LOC_Os11g06750 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g47420.1 |
| Rice Genome Annotation | LOC_Os07g47420.1 |
| Ricechip | LOC_Os07g47420.1 |
| KEGG | osa:4344241 dosa:Os07t0670600-01 |
| Entrez-Gene | 4344241 |