RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g47500.4 View Network Show in Genome Browser |
| Other Names | Os07g0671700 |
| Description | histone-arginine methyltransferase CARM1, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 28402316-28409659 Nucleotide Length: 1173 |
| Protein-coding | LOC_Os07g47500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04490 LOC_Os07g20150 LOC_Os04g31000 LOC_Os02g56020 LOC_Os02g51030 LOC_Os01g03090 LOC_Os01g49250 LOC_Os04g01480 |
| Downstream Genes | LOC_Os12g10200 LOC_Os11g35340 LOC_Os08g42760 LOC_Os08g12430 LOC_Os09g21360 LOC_Os09g02700 LOC_Os08g22354 |
| Reference | |
|---|---|
| PubMed | 21853042 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g47500.4 |
| Rice Genome Annotation | LOC_Os07g47500.4 |
| Ricechip | LOC_Os07g47500.4 |
| KEGG | osa:4344248 dosa:Os07t0671700-01 |
| Entrez-Gene | 4344248 |