RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g47530.1 View Network Show in Genome Browser |
| Other Names | Os07g0672500 |
| Description | AAA-type ATPase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 28423642-28434285 Nucleotide Length: 3246 |
| Protein-coding | LOC_Os07g47530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g49140 LOC_Os05g49230 LOC_Os03g60750 LOC_Os07g42632 LOC_Os07g09720 LOC_Os02g40460 LOC_Os06g04610 LOC_Os06g07896 LOC_Os02g16670 LOC_Os02g55940 LOC_Os05g49970 More.. |
| Downstream Genes | LOC_Os09g27270 LOC_Os10g36860 LOC_Os09g34010 LOC_Os12g21500 LOC_Os10g28640 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g47530.1 |
| Rice Genome Annotation | LOC_Os07g47530.1 |
| Ricechip | LOC_Os07g47530.1 |
| KEGG | osa:4344250 dosa:Os07t0672500-02 |
| Entrez-Gene | 4344250 |