RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g47580.1 View Network Show in Genome Browser |
| Other Names | Os07g0673100 |
| Description | ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 28448556-28451203 Nucleotide Length: 780 |
| Protein-coding | LOC_Os07g47580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g49210 LOC_Os07g29320 LOC_Os01g59500 LOC_Os07g20580 LOC_Os01g33050 LOC_Os05g48422 LOC_Os07g19190 LOC_Os04g43140 LOC_Os03g51900 LOC_Os02g49270 LOC_Os03g22890 More.. |
| Downstream Genes | LOC_Os10g31520 LOC_Os10g35280 LOC_Os09g37860 LOC_Os12g29660 LOC_Os12g04010 LOC_Os11g01420 LOC_Os11g04200 LOC_Os12g01430 LOC_Os08g31810 LOC_Os09g30210 LOC_Os11g06750 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1439 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g47580.1 |
| Rice Genome Annotation | LOC_Os07g47580.1 |
| Ricechip | LOC_Os07g47580.1 |
| KEGG | osa:4344253 dosa:Os07t0673100-01 |
| Entrez-Gene | 4344253 |